Today's exercises are intended to familiarize you with the basic models of population growth, including exponential, logistic, time-delayed logistic, and discrete logistic.
Also, look at the R code for the Ricker's equation covered in class (text file in this directory). Play around with it. (Make sure to turn the history "on" in the plot window after you make the first plot). Can you write code to make a bifurcation diagram?
Begin with the default settings for these parameters (N0 = 10, r = 0.1, & generations = 10) and run the simulation. Examine the relationship between N and time. What is the pattern. Does the population grow or decline? What is the final population size?
Use the space key to view the graphs of N, log N, dN/dt, and dN/(Ndt) vs time. Examine all four patterns. Which patterns are similar to each other? What is the relationship between dN/(Ndt) vs time and r?
Now, change the value of r to r = .2. What is the final population size? Examine the four graphs again. Is there a change in the patterns from the previous parameter values?
Now change the value of r to r= -.1. Run the simulation and examine the graphs. How have the graphs changed?
The default parameter values are N0 = 5, K = 500, and r = 0.2. Run the simulation with these parameter values, switch views (using the space bar), and examine the relationships between N and log N vs time, and dN/dt and dN/(Ndt) versus density. How do these relationships differ from the density independent model? At what density (relative to K) is the rate of population growth (dN/dt) maximal? At what density (relative to K) is the per capita rate of population growth maximal? What is the relationship between K and the final population density? What is the relationship between r and the final population density?
Now, modify the value of K and rerun the simulation. What is the relationship between the final population density and the value of K? Are the shapes of the relationships of dN/dt and dN/(Ndt) with density affected by the value of K? Are the shapes of the relationships of N and log N with time affected by K? How long does it take for the population to come within 10% of its final value?
Now modify the value of r, perhaps doubling it, and run the simulation. What is the relationship between the final population density and the value of r? How long does it take for the population to come within 10% of its final value?
Now modify the value of N0 so that N0 is greater than K, and run the simulation again. What are the patterns in the four graphs now?
Return the value of T to T = 1, so that there is a short time lag, and now do a series of runs in which the you set the value of r to larger and larger values. At what value of r do you observe a noticeable overshoot of K? At what value of r do you begin to observe a series of damped oscillations? At what value of r do you begin to observe fluctuations that do not apparently dampen out? Overall, how would you characterize the effect of r on the pattern of growth when there is a short time lag?
Now explore the effect of both T and r together on the pattern of population growth. For example, set the value of T to T = 3, and run through a series of values for r. Or, set the value of r to a higher value, such as r = 1.0 and run through the series of time lags, from T = 0 to T = 5. How would you characterize the interaction between r and T in generating the different patterns of population growth?
Do a series of runs, slowly increasing the value of r until you notice a change in the pattern of population growth. What is the new pattern of population growth? At what value of r do you notice this change?
Continue increasing the value of r until you notice another qualitative change in the pattern of population growth. What is this new pattern, and at what value of r does it occur?
Continue increasing the value of r until you notice another qualitative change in the pattern of population growth. What is this new pattern, and at what value of r does it occur?
What kinds of factors are likely to generate time lags?
Are the conditions that lead to wild patterns of population growth likely to occur in nature, and if so, for what kinds of organisms?
If you saw a pattern of population densities in the field that looked like the patterns seen for discrete logistic growth with high values of r, would you be able to figure out from the field data the rule the population was following?
Thanks to John Addicott